Below is a list of selected peer-reviewed publications. To see a list of all publications from our lab members, visit our lab’s Google Scholar profile.

Selected Publications


  • Hernandez, S.M. and Pollonini, L. (2020) NIRSplot: A Tool for Quality Assessment of fNIRS Scans. In: Biophotonics Congress: Biomedical Optics 2020 (Translational, Microscopy, OCT, OTS, BRAIN), OSA Technical Digest (Optica Publishing Group, 2020), paper BM2C.5. Link

  • Orihuela-Espina, F., Leff, D.R., James, D.R., Darzi, A.W. and Yang, G.Z. (2018). Imperial College near infrared spectroscopy neuroimaging analysis framework. Neurophotonics, 5(1), pp.011011-011011. Link

  • Montero-Hernandez, S., Orihuela-Espina, F., Sucar, L.E., Pinti, P., Hamilton, A., Burgess, P., Tachtsidis, I. (2018) Estimating Functional Connectivity Symmetry between Oxy- and Deoxy-Haemoglobin: Implications for fNIRS Connectivity Analysis. Algorithms 11, 70. Link

  • Mesquita, R. C., Durduran, T., Yu, G., Buckley, E. M., Kim, M. N., Zhou, C., Choe, R., Sunar, U. & Yodh, A. G. (2011). Direct measurement of tissue blood flow and metabolism with diffuse optics. Philosophical Transactions. Series A, Mathematical, Physical, and Engineering Sciences, 369(1955), 4390–4406. Link

  • Mesquita, R. C., Franceschini, M. A. & Boas, D. A. (2010). Resting state functional connectivity of the whole head with near-infrared spectroscopy. Biomedical Optics Express, 1(1), 324–336. Link

  • Orihuela-Espina, F., Leff, D.R., James, D.R., Darzi, A.W. and Yang, G.Z. (2010). Quality control and assurance in functional near infrared spectroscopy (fNIRS) experimentation. Physics in Medicine & Biology, 55(13), p.3701. Link

  • Dehghani, H., Eames, M. E., Yalavarthy, P. K., Davis, S. C., Srinivasan, S., Carpenter, C. M., Pogue, B. W. & Paulsen, K. D. (2009). Near infrared optical tomography using NIRFAST: Algorithm for numerical model and image reconstruction. Communications in Numerical Methods in Engineering, 25(6), 711–732. Link

  • Dehghani, H., Srinivasan, S., Pogue, B. W. & Gibson, A. (2009). Numerical modelling and image reconstruction in diffuse optical tomography. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, 367, 3073–3093. Link